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Yale Microarray Database
(YMD)

Janet Hager, Ph.D.
300 George Street
Room 2115
New Haven CT, 06511

Kei-Hoi Cheung, Ph.D.
333 Cedar Street
PO Box 208009
New Haven, CT 06520

 

Yale University School of Medicine

 

Contact Us


The Yale Microarray Database Project is a collaborative effort between several laboratories and centers to meet the urgent need to:

  • Archive (i.e. Oracle) and retrieve via query statements microarray images (each of which may be 50 megabytes for a two channel experiment) and accompanying analysis data from hundreds of different investigators.
  • Link each high resolution (i.e. single pixel) spot image with its attendant quantitative analysis data and NCBI sequence database entry.
  • Enable the facile use of a variety of statistical tools (some of which should be provided within the software package - others of which are available on the Web or will be developed later) to judge the significance of the microarray data and to then analyze it (i.e. cluster analysis).
  • Make all of the above available via a web based interface.

If you are interested in supporting this effort, either at the university, departmental, section, or individual level please contact any of the YMD people.

Current Status

Work in Progress and Future Goals

Downloads and Tools

Microarray Research at Yale University

Other Microarray Links

Publications

YMD People

Data Analysis
Commercial analysis software available through Keck workstations

ExpressYourself and other tools from Dr. Mark Gerstein's laboratory

Custom tools from Dr. Hongyu Zhao's laboratory

Academic software available from other sites

Publications by YMD people about data analysis

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Medical Center Yale-New Haven Hospital Yale University

Copyright © 2003, Yale University, New Haven, Connecticut, USA. All rights reserved.
Comments or suggestions to Greg Blasko.

Last modified: 28-Mar-2003 (GB)