The Red Shirt Diaries: Laboratory of Neuroscience, Yale University

People Working In The Lab
Larry CohenChun X. FalkDejan ZecevicBrad BakerStratos Kosmidis beforeStratos Kosmidis afterRiota Homma

They are Larry Cohen, Chun X. Bleau, Dejan Zecevic, Brad Baker, Stratos Kosmidis and Riota Homma.


One reason the brain is difficult to study is that many individual neurons or brain areas are active at once; conventional techniques allow one to monitor only one or a few neurons or locations at a time. We have worked on several variations of an optical method for measuring brain activity; utilizing both voltage-sensitive dyes and calcium-sensitive dyes and either a 464 element photodiode array (see photograph of array) or a 80x80 CCD camera. Both systems are fast; frame rates >1.6kHz.

In the First variation (Population Signals, Larry Cohen), each pixel in the recording receives light from a large number of neurons and processes (e.g. from an area of brain 10µm x 10µm to 200µm x 200µm) and thus each signal represents the average of a population of neurons. There are several interesting aspects of vertebrate brain function where populations are involved. One example is the organization of visual cortex into modules such as ocular dominance columns. Another is the synchrony and oscillations that accompany sensory processing. A third is maps of the input to glomeruli in the olfactory bulb where 10,000 receptor neurons with identical olfactory receptor protein converge onto a single glomerulus. For studying phenomena of this type population recordings should be useful.

In the Second variation (Inside Dyes, Dejan Zecevic), each pixel in the recording receives light from a small portion of a neurons which has been stained by microinjection of the dye into the cell body. After waiting for the dye to spread into the processes, the dye can be used to monitor changes in membrane potential in dendrites and axons.

In the Third variation (Action Potential Signals), we use the dyes to follow the spike activity of individual neurons, and in favorable preparations about 500 individual neurons can be monitored simultaneously. In ganglia from sea slugs (opisthobranch molluscs, Aplysia), this number is a substantial fraction of the total number of neurons present. We hope that monitoring many neurons simultaneously will improve our understanding about how nervous systems are organized to generate behaviors.

The figure illustrates the voltage-sensitive dye signal (dots) and the action potential (smooth line) measured simultaneously from a squid giant axon. The two signals follow each other precisely providing one kind of evidence that this dye signal is potential dependent.

Changes in absorption, fluorescence, dichroism, and birefringence in stained giant axons : optical measurement of membrane potential.

Ross, W.N., B.M. Salzberg, L.B. Cohen, A. Grinvald, H.V. Davila, A.S. Waggoner, and C.H. Wang (1977). Changes in absorption, fluorescence, dichroism, and birefringence in stained giant axons : optical measurement of membrane potential. J Membr Biol, 33, 141-183.


Lab Description

Ours is a small laboratory in the Department of Physiology. It consists of two PIs each with one to three other scientists. One of the reasons for having a small laboratory is that the PIs still enjoy doing experiments and a large laboratory makes that impossible. In addition, there are only two experimental set-ups. Thus, the planning, the experiments, and the analysis have always been done in a very collaborative fashion with everyone sharing their opinions and efforts.
You may have noticed that all of the individuals are smiling. This must mean that the experiments are easy.


Recently Left the Lab

Srdjan Antic Tsau Yang Chris Hickie Avrum Cohen Fang Jing Lam Ying-Wan Michel Zochowski Matt Wachowiak Dejan VucinicMaja Djurisic

(Left to Right)
Srdjan Antic: Department of Neurobiology, Yale University School of Medicine
Tsau Yang
Chris Hickie: University of Connecticut Medical School.
Avrum Cohen's Homepage. Avrum was a programmer at the lab off and on until his employment at Universal Imaging Corporation in December of 1995.
Fang Jing
Lam Ying-Wan: Department of Neurobiology, SUNY Stony Brook.
Michal Zochowski  Department of Physics, University of Michigan.
Matt Wachowiak  Department of Biology, Boston University.
Dejan Vucinic Department of Physiology, Northwestern University.
Maja Djurisic Department of Neurobiology, Harvard Medical School.


Not So Recently

Vicencio Davila, Universidad de Los Andes, Merida, Professor and Chairman, Department of Physiology.
Brian Salzberg, University of Pennsylvania School of Medicine, Professor of Neuroscience. 
William Ross
New York Medical College, Professor of Physiology.
Amiram Grinvald, Weizmann Institute of Science, Israel, Professor and Chairman, Department of Neurobiology.
Kohtaro Kamino, Tokyo Medical and Dental University, Professor of Physiology.
Harry Orbach, Glasgow Caledonian University, Instructor, Department of Vision Sciences.
Martine Cattarelli, CNRS, Dijon, Charge de Recherche.
Jian-young Wu, Georgetown University, Asst. Professor, Institute of Cognitive and Computational Sciences.

Ask the Expert
Which Voltage Sensitive Dye?


Dye Synthesizers

We depend on them.

Les Loew Joe Wuskell Amiram Grinvald Rina Hildesheim

(Left to right) Les Loew and Joe Wuskell from the University of Connecticut Health Center, Farmington, CT and Amiram Grinvald and Rina Hildesheim from the Weizmann Institute, Rehovot, Israel.


From 1975

Folks from 1975


For a home page that will bring tears to Finkelstein's eyes see Laboratory of Molecular Hermeneutics.

Barbara Ehrlich


For more information about the laboratory

Send e-mail to: lawrence.cohen@yale.edu
Or write to: Department of Cellular and Molecular Physiology, School of Medicine, 333 Cedar Street, New Haven Connecticut 06520-8026
Or phone: (203)785-4047; FAX (203)785-6871
Summer phone: (508)289-7324; FAX (509)289-7917


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Last updated 12.12.2005 11:00 APM ean

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